Cellular Agent-based Modeling from a Clean Slate
cellular_raza is a cellular
agent-based modeling framework
which allows researchers to construct models from a clean slate.
In contrast to other agent-based modelling toolkits, it is free of assumptions about the underlying
cellular representation.
This enables researchers to build up complex models while retaining full control over every
parameter and behaviour introduced.
Selected Showcases
A mechanical model of elongated bacteria such as E.Coli growing inside a narrow box.
A vertex-based mechanical model which allows for gaps between cells.
Selected Benchmarks
We compare the solvers of
cellular_raza with analytical results with estimates for the local and global truncation error.
We analyze scaling with multiple threads using the
chili backend and the cell-sorting simulation.